CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Acaryochloris marina MBIC11017 (NC_009925 6503725 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 166     Density of SSR      : 1SSR/ 39.18 kb   Average length of SSR  : 12.64 bp
Coding      : 144     Non-Coding           : 21   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 92 58 6 8 166
IMPERFECT 1 120 1511 1177 131 112 3052
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GTGAA)31512463541246368Coding
2. (AAAAT)31512748821274896Non coding
3. (CTAAA)31516486431648657Non coding
4. (CCATT)31528572462857260Coding
5. (GATGC)31539560253956039Coding
6. (ACTCA)31553796505379664Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.