CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Anabaena sp. 90 (NC_019427 4329265 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 257     Density of SSR      : 1SSR/ 16.78 kb   Average length of SSR  : 13.5 bp
Coding      : 190     Non-Coding           : 61   Coding and Non-Coding : 7
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 136 93 8 17 257
IMPERFECT 4 132 1675 1289 145 129 3374
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TAATCC)318888314888331Coding
2. (TTTCTC)31810292391029256Coding
3. (CAGAAG)31811172661117283Coding
4. (CTTTTT)31811933551193372Non coding
5. (CATGAA)53015527441552773Coding
6. (AGGTAA)31816237841623801Coding
7. (AGGAAG)42420046032004626Coding
8. (AAATAA)31822313612231378Coding
9. (TTACCG)42424310692431092Coding
10. (CCATTG)31824310962431113Coding
11. (CTGTTG)42425308402530863Coding
12. (CTGGGG)31825888272588844Coding
13. (AGGAAT)31831109203110937Coding
14. (ATCTAA)31833404003340417Coding
15. (AAAACT)31834683333468350Coding
16. (AGGATT)31838341753834192Coding
17. (GGGGAA)31840670104067027Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.