CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Anabaena sp. 90 (NC_019427 4329265 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 257     Density of SSR      : 1SSR/ 16.78 kb   Average length of SSR  : 13.5 bp
Coding      : 190     Non-Coding           : 61   Coding and Non-Coding : 7
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 136 93 8 17 257
IMPERFECT 4 132 1675 1289 145 129 3374
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTTAT)4206068560704Non coding
2. (AAACA)315401477401491Coding
3. (TATTT)315509150509164Non coding
4. (AGAAG)31511323211132335Non coding
5. (TTTTG)31511959901196004Coding
6. (TTTCC)31518541981854212Coding
7. (TGGTG)31528057322805746Non coding
8. (AAATT)31542545134254527Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.