CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Anabaena variabilis ATCC 29413 (NC_007413 6365728 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 267     Density of SSR      : 1SSR/ 23.75 kb   Average length of SSR  : 13.1 bp
Coding      : 236     Non-Coding           : 30   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 159 80 6 21 267
IMPERFECT 0 211 2175 1731 162 145 4424
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GGTGCA)318963220963237Coding
2. (TTTTAT)31815939411593958Coding
3. (AACCAG)31818159931816010Coding
4. (GATTGG)31828719762871993Non coding
5. (TTGACC)31830453303045347Coding
6. (TTGACC)31830453573045374Coding
7. (TTGACC)31830453843045401Coding
8. (TTGACC)31830454113045428Coding
9. (TTGACC)31830454383045455Coding
10. (AGCCCA)31835539763553993Coding
11. (CCCAAC)31838919373891954Coding
12. (CCCAAC)31838919613891978Coding
13. (CCCAAC)31838920033892020Coding
14. (CCCAAC)31838920693892086Coding
15. (CCAGCA)42439439913944014Coding
16. (CCCAAC)31846775564677573Coding
17. (ATACAT)31851754415175458Coding
18. (GGTATT)42452010635201086Coding
19. (GGTATT)42452010905201113Coding
20. (TGGTAT)42452011165201139Coding
21. (AGCACC)31852873095287326Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.