CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Calothrix sp. PCC 6303 (NC_019751 6767835 bp)                                                               Show Primer       Download
Compound : 3     Perfect Compound : 3   Overlapping Compound : 0
Perfect      : 263     Density of SSR      : 1SSR/ 25.44 kb   Average length of SSR  : 13.59 bp
Coding      : 189     Non-Coding           : 69   Coding and Non-Coding : 8
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 126 99 16 19 263
IMPERFECT 3 212 2272 1866 199 173 4725
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TCCTTT)318259023259040Non coding
2. (GTCTCG)424324726324749Non coding
3. (AGTATC)318558970558987Coding
4. (TATCAA)318575232575249Coding
5. (TAATCC)318687036687053Coding
6. (AGACGA)31824056412405658Coding
7. (CCATTT)42445184164518439Coding
8. (AGAGAA)31846393224639339Non coding
9. (CTAATC)31846403814640398Coding
10. (TAATCC)31846417844641801Coding
11. (CACAGC)31851770875177104Coding
12. (ATATCG)31856389145638931Coding
13. (TTTATT)31856863305686347Coding
14. (GAACCA)42461424606142483Coding
15. (GTTGGG)31862730776273094Coding
16. (GGTTGA)31864228216422838Coding
17. (GCCATC)42464294096429432Coding
18. (CATCGC)31864294476429464Coding
19. (TATTTT)31865812146581231Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.