CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Calothrix sp. PCC 6303 (NC_019751 6767835 bp)                                                               Show Primer       Download
Compound : 3     Perfect Compound : 3   Overlapping Compound : 0
Perfect      : 263     Density of SSR      : 1SSR/ 25.44 kb   Average length of SSR  : 13.59 bp
Coding      : 189     Non-Coding           : 69   Coding and Non-Coding : 8
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 126 99 16 19 263
IMPERFECT 3 212 2272 1866 199 173 4725
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GGGTT)315828515828529Coding
2. (TAATT)31513557311355745Non coding
3. (TAATT)31516325511632565Non coding
4. (TTGAA)31522427842242798Non coding
5. (GGGTT)31525196802519694Coding
6. (TTGTT)31534917413491755Coding
7. (TAAAC)31542750294275043Coding
8. (GCATG)31543065764306590Non coding
9. (TAATT)31548806304880644Coding
10. (TTTTA)42050820175082036Non coding
11. (ATTTG)31554894365489450Non coding
12. (GGTTT)31560204856020499Coding
13. (TATTT)31561355546135568Non coding
14. (TTGCT)31561763286176342Coding
15. (AATCA)42062722756272294Non coding
16. (AATTT)31563342476334261Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.