CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Chroococcidiopsis thermalis PCC 7203 (NC_019695 6315793 bp)                                                               Show Primer       Download
Compound : 2     Perfect Compound : 0   Overlapping Compound : 2
Perfect      : 239     Density of SSR      : 1SSR/ 26.21 kb   Average length of SSR  : 12.97 bp
Coding      : 204     Non-Coding           : 31   Coding and Non-Coding : 6
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 1 122 93 8 14 239
IMPERFECT 1 188 1849 1758 168 152 4116
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (AAGTT)315524029524043Coding
2. (ATTAC)31511959441195958Non coding
3. (TCTTT)31512783791278393Coding
4. (GGTTT)31522141392214153Coding
5. (GGGTT)31525414642541478Coding
6. (ATTTT)31527645822764596Coding
7. (TTGAA)31537949463794960Non coding
8. (GTTTG)31552122595212273Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.