CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Crinalium epipsammum PCC 9333 (NC_019753 5315555 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 274     Density of SSR      : 1SSR/ 19.4 kb   Average length of SSR  : 12.88 bp
Coding      : 215     Non-Coding           : 57   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 3 153 97 6 13 274
IMPERFECT 10 165 1880 1482 141 153 3831
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GACCAC)318248345248362Coding
2. (ACAACT)31812893921289409Coding
3. (CCTTTG)31814009601400977Coding
4. (AGATCT)31816528481652865Coding
5. (CCAGTA)42419922301992253Coding
6. (GGTGGC)31830535073053524Coding
7. (TAGCCC)31835427243542741Coding
8. (TAGCAT)31841966354196652Coding
9. (CAACTT)31844693714469388Coding
10. (AAACCT)31848991944899211Coding
11. (CAGCAC)53050916565091685Coding
12. (AGCACC)84850917505091797Coding
13. (GACCAC)31850948895094906Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.