CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Cyanobacterium stanieri PCC 7202 (NC_019778 3163382 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 192     Density of SSR      : 1SSR/ 16.48 kb   Average length of SSR  : 12.31 bp
Coding      : 156     Non-Coding           : 28   Coding and Non-Coding : 8
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 122 59 4 6 192
IMPERFECT 2 119 1461 1098 135 106 2921
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTTTGA)318737069737086Coding
2. (TTTCCC)31812904351290452Coding
3. (TTTCTT)31818295911829608Coding
4. (GAACCT)31822813932281410Coding
5. (CATTAC)31825648472564864Coding
6. (ATCATG)31828308642830881Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.