CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanobium gracile PCC 6307 (NC_019675 3342365 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 805     Density of SSR      : 1SSR/ 4.15 kb   Average length of SSR  : 12.73 bp
Coding      : 765     Non-Coding           : 40   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 0 681 83 9 27 805
IMPERFECT 6 58 4641 1300 167 255 6427
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CACCGG)318228060228077Coding
2. (CCAGGG)318357848357865Coding
3. (GCCAGG)318427229427246Coding
4. (GACCAT)318545233545250Coding
5. (TTGCCG)318613803613820Coding
6. (TGGCGA)318871723871740Coding
7. (GCCTGG)31810842511084268Coding
8. (CCGGCC)31812481231248140Coding
9. (GCCGGT)42415473031547326Coding
10. (ACCAGC)31816935141693531Coding
11. (CGGCAC)31817458291745846Coding
12. (GGAGGC)42417984191798442Coding
13. (GCGGCA)31818206031820620Coding
14. (CCCTGG)31819334081933425Coding
15. (GCCACC)31821487172148734Coding
16. (GCCAGG)31823220412322058Coding
17. (CCGGCG)31824679392467956Coding
18. (GCCAGC)31824908422490859Coding
19. (CACACT)74225833672583408Non coding
20. (GCTTCG)31826847352684752Coding
21. (TGCCGA)31828201602820177Coding
22. (TGGCGG)31828442242844241Coding
23. (TGTCGC)31828824252882442Coding
24. (TGCCGC)31830304633030480Coding
25. (CTGGCC)31831224813122498Coding
26. (CGGTGG)31831281183128135Coding
27. (CCCATC)42432802233280246Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.