CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Cyanobium gracile PCC 6307 (NC_019675 , 3342365 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 805     Density of SSR      : 1SSR/ 4.15 kb   Average length of SSR  : 12.73 bp
Coding      : 765     Non-Coding           : 40   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 0 681 83 9 27 805
IMPERFECT 6 58 4641 1300 167 255 6427
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CGGCG)315227063227077Coding
2. (GCGGC)315768937768951Coding
3. (GGGGA)31510160361016050Non coding
4. (CGCCC)31513083201308334Coding
5. (CCAGC)31515790711579085Coding
6. (CCGCA)31519580261958040Non coding
7. (GCGGC)31521491022149116Coding
8. (GGGCC)31526954752695489Coding
9. (GGGGC)31528848002884814Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.