CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. ATCC 51142 (NC_010546 4934272 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 284     Density of SSR      : 1SSR/ 17.37 kb   Average length of SSR  : 12.61 bp
Coding      : 231     Non-Coding           : 44   Coding and Non-Coding : 9
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 2 158 98 15 10 284
IMPERFECT 4 127 2230 1469 193 127 4150
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (AGAACA)318922161922178Coding
2. (GGTGGC)318923164923181Coding
3. (AACGGC)31820252492025266Coding
4. (CGGTGG)31823393112339328Coding
5. (GGGTTT)31828362162836233Coding
6. (TTCTCC)31829508552950872Coding
7. (TTTGCT)31829934352993452Coding
8. (TAAAAA)31830432403043257Coding
9. (TGGCAA)53037773243777353Coding
10. (ATCAAC)31842290744229091Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.