CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. ATCC 51142 (NC_010546 4934272 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 284     Density of SSR      : 1SSR/ 17.37 kb   Average length of SSR  : 12.61 bp
Coding      : 231     Non-Coding           : 44   Coding and Non-Coding : 9
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 2 158 98 15 10 284
IMPERFECT 4 127 2230 1469 193 127 4150
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTGGG)3154542745441Coding
2. (TAAAA)315255860255874Non coding
3. (AAATA)315478982478996Coding
4. (CCTCT)315570147570161Non coding
5. (GTAAA)31511354891135503Coding
6. (GACAA)31524037752403789Coding
7. (GGTTT)31524297212429735Coding
8. (GATAA)42024521772452196Non coding
9. (TATGT)31530700443070058Coding
10. (TCACA)31533450013345015Non coding
11. (TAAAA)31535876923587706Coding
12. (TCCTA)31537604203760434Non coding
13. (AACCC)31538873593887373Coding
14. (TTTAT)31546653464665360Non coding
15. (TTCCT)31548666164866630Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.