CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. ATCC 51142 (NC_010547 429702 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 32     Density of SSR      : 1SSR/ 13.43 kb   Average length of SSR  : 12.38 bp
Coding      : 22     Non-Coding           : 8   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 18 12 1 1 32
IMPERFECT 1 8 179 117 16 10 331
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ATC)4124907049081Coding
2. (ATT)4125387053881Coding
3. (ATT)4129163491645Coding-Non coding
4. (TAG)412120783120794Coding
5. (ATG)412121842121853Coding
6. (CTT)412130149130160Coding
7. (GGT)412130417130428Coding
8. (CAA)412166394166405Non coding
9. (CTA)412169453169464Coding
10. (GAA)412172840172851Coding
11. (TCT)412225458225469Coding
12. (TCA)412237483237494Coding
13. (AGA)412287995288006Non coding
14. (TAT)412288535288546Non coding
15. (TTC)412307612307623Coding
16. (AAT)515309097309111Coding
17. (GAT)412336842336853Coding
18. (TTC)412420798420809Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.