CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. PCC 7424 (NC_011729 5942653 bp)                                                               Show Primer       Download
Compound : 2     Perfect Compound : 1   Overlapping Compound : 1
Perfect      : 384     Density of SSR      : 1SSR/ 15.4 kb   Average length of SSR  : 12.97 bp
Coding      : 255     Non-Coding           : 112   Coding and Non-Coding : 19
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 3 185 155 14 25 384
IMPERFECT 14 165 2198 1795 248 172 4592
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ATTAG)315106223106237Coding-Non coding
2. (AACTT)315654261654275Non coding
3. (AATTA)31513768441376858Non coding
4. (AATTA)31517227181722732Non coding
5. (TTTAA)31518809491880963Non coding
6. (TAAAA)31519920931992107Non coding
7. (TAACA)31521380732138087Coding
8. (CCTTA)31524514292451443Non coding
9. (TGTGA)31537915143791528Non coding
10. (AATTA)42039069053906924Non coding
11. (AGTTG)31541617364161750Non coding
12. (ACCCA)31546426314642645Coding
13. (AAGAT)31547769784776992Non coding
14. (AATAA)52555743665574390Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.