CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. PCC 7425 (NC_011884 5374575 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 205     Density of SSR      : 1SSR/ 26.22 kb   Average length of SSR  : 12.8 bp
Coding      : 185     Non-Coding           : 20   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 1 110 68 9 16 205
IMPERFECT 1 107 1353 1176 169 110 2916
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GGGCA)315163436163450Coding
2. (GGTTG)31510682221068236Coding
3. (GGATT)31527644732764487Coding
4. (CCCCG)31539524123952426Coding
5. (CCAGC)31540632264063240Coding
6. (GGACT)31544048604404874Coding
7. (TCAGG)31546742624674276Coding
8. (GCCCT)31549489844948998Coding
9. (CCAGG)31551724335172447Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.