CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Cyanothece sp. PCC 7822 (NC_014501 6091621 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 298     Density of SSR      : 1SSR/ 20.44 kb   Average length of SSR  : 12.75 bp
Coding      : 242     Non-Coding           : 50   Coding and Non-Coding : 6
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 184 84 11 18 298
IMPERFECT 8 171 2068 1635 168 152 4202
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTAAC)315822964822978Non coding
2. (TCTTT)31510245751024589Coding
3. (GGCGA)31510650671065081Coding
4. (TAATT)31530665493066563Non coding
5. (ACAAA)31533922703392284Coding
6. (CTTAT)31545379464537960Non coding
7. (TAAAA)31545492324549246Non coding
8. (TGTGA)31547494674749481Non coding
9. (TTGGG)31549305134930527Non coding
10. (AAATT)31552937315293745Coding
11. (TTGTC)31554479545447968Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.