CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Dactylococcopsis salina PCC 8305 (NC_019780 3781009 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 209     Density of SSR      : 1SSR/ 18 kb   Average length of SSR  : 13.05 bp
Coding      : 135     Non-Coding           : 70   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 4 102 78 10 15 209
IMPERFECT 1 158 1303 1009 120 99 2690
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GCTGGT)424182925182948Coding
2. (CCGTTA)318323163323180Coding
3. (TAACGG)318855389855406Coding
4. (TAACGG)318855689855706Coding
5. (TAACGG)318855986856003Coding
6. (TAACGG)318856286856303Coding
7. (AAAGTG)31813995831399600Coding
8. (AGACTT)31814848371484854Coding
9. (TAAGCA)31816677621667779Coding
10. (GAACCT)63620644042064439Coding
11. (AATTGA)31821610192161036Coding
12. (CCATTA)31823814532381470Coding
13. (CTACGA)31825904092590426Non coding
14. (TTCGGG)31828414272841444Coding
15. (TTTAGT)31828668862866903Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.