CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Geitlerinema sp. PCC 7407 (NC_019703 4681112 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 302     Density of SSR      : 1SSR/ 15.5 kb   Average length of SSR  : 12.83 bp
Coding      : 275     Non-Coding           : 27   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 213 58 12 19 302
IMPERFECT 0 151 2471 988 120 143 3873
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CGTCGC)318112986113003Coding
2. (GCCAGC)318224283224300Coding
3. (GGCTCT)318374033374050Coding
4. (TGGCTT)318455420455437Coding
5. (CGTCAC)318518826518843Coding
6. (TCACCG)318522887522904Coding
7. (GCGATC)31813641431364160Coding
8. (GGCCCA)31815680291568046Coding
9. (GCCCAA)31816667351666752Coding
10. (GGGGCT)31816994361699453Coding
11. (CCAGCC)31817001401700157Coding
12. (ACGCCA)31820619442061961Coding
13. (GGCCGA)31825518952551912Coding
14. (GCCACC)31829489052948922Coding
15. (GGTGGC)42431452393145262Coding
16. (CGGCGA)31834889533488970Coding
17. (GCCAGC)31835517483551765Coding
18. (GCCAGC)31839279273927944Coding
19. (TGCCGC)31845007454500762Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.