CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Geitlerinema sp. PCC 7407 (NC_019703 4681112 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 302     Density of SSR      : 1SSR/ 15.5 kb   Average length of SSR  : 12.83 bp
Coding      : 275     Non-Coding           : 27   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 213 58 12 19 302
IMPERFECT 0 151 2471 988 120 143 3873
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GCCTA)315309619309633Non coding
2. (GGGCG)315392448392462Coding
3. (GGGGC)315627159627173Coding
4. (GAGCC)31517209621720976Coding
5. (CGCCG)31523341542334168Coding
6. (TTCCA)42027572932757312Non coding
7. (GGTGT)31532419373241951Non coding
8. (CAGCC)31532962843296298Coding
9. (GCTGG)31535809163580930Coding
10. (GCCGC)31543297054329719Coding
11. (TGGGT)31544278794427893Non coding
12. (CCGCG)31546367184636732Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.