CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Gloeobacter sp. JS (NC_022600 4724792 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 360     Density of SSR      : 1SSR/ 13.12 kb   Average length of SSR  : 13.05 bp
Coding      : 336     Non-Coding           : 23   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 195 108 20 36 360
IMPERFECT 0 110 2773 1317 157 196 4553
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ACCAG)315401043401057Coding
2. (GCCCG)315782322782336Coding
3. (CTGAA)315782865782879Coding
4. (TGCGC)315963468963482Non coding
5. (GCCGG)31511286971128711Coding
6. (GAGCT)31511365341136548Coding
7. (CCCCG)31511592041159218Coding
8. (TCAGC)31512545421254556Coding
9. (CGCCC)31515712531571267Coding
10. (GCGCG)31524940542494068Coding
11. (CCGCG)31526363412636355Coding
12. (GCCCG)31526851332685147Non coding
13. (GTGCG)31527974632797477Coding
14. (CCGCC)31528308552830869Coding
15. (CGGGG)31528981062898120Coding
16. (CGCCC)31529807992980813Coding
17. (AGCAA)31530150333015047Coding
18. (CGGGC)31530734053073419Coding
19. (CCGCC)31533862143386228Coding
20. (CCCGG)31537630673763081Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.