CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Gloeobacter violaceus PCC 7421 (NC_005125 4659020 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 507     Density of SSR      : 1SSR/ 9.17 kb   Average length of SSR  : 12.78 bp
Coding      : 476     Non-Coding           : 28   Coding and Non-Coding : 4
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 7 346 123 13 18 507
IMPERFECT 2 266 3187 1345 149 167 5116
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CAGGGC)318262278262295Coding
2. (CGAGGG)318746428746445Coding
3. (CGAGCG)31810899551089972Coding
4. (CGCCCG)31811678671167884Coding
5. (GTCGAG)31812392921239309Coding
6. (CAGCAA)31819136791913696Coding
7. (GCCACC)31819485031948520Coding
8. (TCCATC)31820971022097119Coding
9. (CGGGTA)31821488972148914Coding
10. (GCCGTG)31823117822311799Coding
11. (CCGCCA)42426851412685164Coding
12. (ATCGCC)31833084903308507Coding
13. (CACCAG)31833454343345451Coding
14. (CCGTCG)31835178733517890Coding
15. (CCACCG)31835523953552412Coding
16. (CAGCCC)31839371453937162Coding
17. (GGTGGC)31840758034075820Coding
18. (CGATGC)31843237714323788Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.