CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Gloeobacter violaceus PCC 7421 (NC_005125 4659020 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 507     Density of SSR      : 1SSR/ 9.17 kb   Average length of SSR  : 12.78 bp
Coding      : 476     Non-Coding           : 28   Coding and Non-Coding : 4
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 7 346 123 13 18 507
IMPERFECT 2 266 3187 1345 149 167 5116
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GGCCG)315164759164773Coding
2. (CCCGG)315561658561672Coding
3. (TCGCG)31511870361187050Coding
4. (CGCTG)31512248321224846Coding
5. (CAGCC)31512481061248120Coding
6. (CCGCC)42024280272428046Coding
7. (CCGCG)31525562652556279Coding
8. (GCCCG)31527889852788999Coding
9. (GCTCT)31528437512843765Coding
10. (TGGGT)31529893092989323Coding
11. (GGCGG)31537137913713805Coding
12. (GACGG)31539243773924391Coding
13. (CTTAA)31543614814361495Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.