CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Halothece sp. PCC 7418 (NC_019779 4179171 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 190     Density of SSR      : 1SSR/ 21.88 kb   Average length of SSR  : 13.07 bp
Coding      : 172     Non-Coding           : 16   Coding and Non-Coding : 3
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 120 51 7 10 190
IMPERFECT 1 121 1505 984 115 89 2815
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ATAAA)3151344813462Coding
2. (GGAAA)3154327543289Coding
3. (TTTGG)315737416737430Coding
4. (TTTTG)31515696801569694Coding
5. (CCAAA)31527629282762942Coding
6. (GTGAA)31536581173658131Non coding
7. (TCTTC)31540282424028256Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.