CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Microcoleus sp. PCC 7113 (NC_019738 7470430 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 225     Density of SSR      : 1SSR/ 33.06 kb   Average length of SSR  : 13.95 bp
Coding      : 183     Non-Coding           : 39   Coding and Non-Coding : 4
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 3 96 80 8 37 225
IMPERFECT 3 218 1825 1715 190 173 4124
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CGAGA)315789197789211Non coding
2. (TATTT)31511548451154859Coding
3. (GATGT)42022445162244535Coding-Non coding
4. (ACTGA)31522870892287103Non coding
5. (CACAC)31523928622392876Non coding
6. (TTTTG)31539814003981414Coding
7. (GATTG)31566123606612374Coding
8. (CAAAG)31567998786799892Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.