CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Microcystis aeruginosa NIES-843 (NC_010296 5842796 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 301     Density of SSR      : 1SSR/ 19.41 kb   Average length of SSR  : 13.17 bp
Coding      : 229     Non-Coding           : 65   Coding and Non-Coding : 7
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 4 134 116 8 37 301
IMPERFECT 5 121 1634 1436 153 107 3456
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTTAT)315109279109293Coding
2. (TTAGT)315117339117353Non coding
3. (TCCTA)315166503166517Non coding
4. (GATAA)31514353191435333Non coding
5. (AATTA)31518011801801194Non coding
6. (AAAGA)31524288632428877Coding
7. (CAATT)31552197515219765Non coding
8. (CAACC)31557637055763719Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.