CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Nostoc punctiforme PCC 73102 (NC_010628 8234323 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 299     Density of SSR      : 1SSR/ 27.45 kb   Average length of SSR  : 13.07 bp
Coding      : 229     Non-Coding           : 64   Coding and Non-Coding : 7
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 152 110 11 23 299
IMPERFECT 2 254 2357 2125 202 205 5145
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTGGCG)318925400925417Coding
2. (AAAGCA)31814426091442626Coding
3. (ACCAAC)31815099821509999Coding
4. (CCATTA)31815674631567480Coding
5. (AGGATT)31816407721640789Coding
6. (CCCTTT)31817340351734052Non coding
7. (CCTTTC)31822371972237214Non coding
8. (AAGGGG)31825971922597209Non coding
9. (GTTGGT)42428189142818937Coding
10. (GCACCA)31834080043408021Coding
11. (GCCGCA)31835323003532317Coding
12. (TTATTG)84841406544140701Non coding
13. (TTGTGG)31853329335332950Coding
14. (CAGCCA)31853684215368438Coding
15. (CCACAG)31853684545368471Coding
16. (CAGCCA)42453685235368546Coding
17. (TGGAGT)42459529225952945Coding
18. (TCAAAA)31860244076024424Non coding
19. (AACTAG)31862203306220347Coding
20. (TAGCTA)31867948556794872Coding
21. (GCCAAA)31878704317870448Coding
22. (CAAGAA)31880764338076450Coding
23. (ACCCAC)31881314178131434Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.