CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Nostoc sp. PCC 7107 (NC_019676 6329824 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 294     Density of SSR      : 1SSR/ 21.46 kb   Average length of SSR  : 12.95 bp
Coding      : 240     Non-Coding           : 50   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 133 126 12 22 294
IMPERFECT 2 196 2214 1695 189 164 4460
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GCAGGT)318534721534738Coding
2. (GCACAA)318734726734743Coding
3. (GGTGCA)31811353641135381Coding
4. (CGCCAC)42414568291456852Coding
5. (AAAATT)31817656841765701Coding
6. (TAGCCA)31827275182727535Coding
7. (GCTGTT)31828359752835992Coding
8. (TTGCTG)31828360272836044Coding
9. (GTTCCG)31829810772981094Coding
10. (ACCAAC)31831024233102440Coding
11. (TTGTGG)31832121373212154Coding
12. (TGTGGG)31832406203240637Coding
13. (TAGCGG)31834406133440630Coding
14. (CCATTG)31835351993535216Coding
15. (AGCCAA)31836665813666598Coding
16. (ACCAAC)31843239904324007Coding
17. (CCTAAA)31845545694554586Coding
18. (TGTTGG)42447267124726735Coding
19. (GGCAGT)42452684485268471Coding
20. (CCAGCA)31852926635292680Coding
21. (CCAGCA)31852926875292704Coding
22. (GGAAAT)31860922506092267Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.