CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Nostoc sp. PCC 7107 (NC_019676 6329824 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 294     Density of SSR      : 1SSR/ 21.46 kb   Average length of SSR  : 12.95 bp
Coding      : 240     Non-Coding           : 50   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 133 126 12 22 294
IMPERFECT 2 196 2214 1695 189 164 4460
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TACAG)3158202282036Coding
2. (AACAT)315694885694899Non coding
3. (TTGTT)315890370890384Non coding
4. (GGTTT)31520410082041022Coding
5. (ATTTT)31524089712408985Non coding
6. (GTTTT)42027600042760023Non coding
7. (CAAAA)31531965113196525Coding
8. (AAAAT)31547735564773570Non coding
9. (GTTTT)31549749714974985Non coding
10. (AAACT)31551149475114961Coding
11. (AATTC)31555791245579138Non coding
12. (AAACT)31563008266300840Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.