CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Pleurocapsa sp. PCC 7327 (NC_019689 4986818 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 186     Density of SSR      : 1SSR/ 26.81 kb   Average length of SSR  : 12.6 bp
Coding      : 131     Non-Coding           : 50   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 1 3 61 108 6 7 186
IMPERFECT 7 161 1334 1443 151 111 3207
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTGCAA)4244173141754Non coding
2. (AAGCCG)31810449931045010Coding
3. (CAAACC)31825127552512772Coding
4. (CTCTCG)31828520782852095Coding
5. (CGATCG)31831187203118737Non coding
6. (TCGCCG)31849089074908924Coding
7. (ATCGCG)31849687664968783Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.