CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Prochlorococcus marinus str. AS9601 (NC_008816 1669887 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 158     Density of SSR      : 1SSR/ 10.57 kb   Average length of SSR  : 13.1 bp
Coding      : 115     Non-Coding           : 37   Coding and Non-Coding : 6
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 3 3 59 71 10 12 158
IMPERFECT 18 66 687 874 103 58 1806
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTTGA)4205904059059Coding
2. (AATTA)315728944728958Coding
3. (TTGCT)315836108836122Coding
4. (CAAAT)315885715885729Coding
5. (TAATT)420945821945840Non coding
6. (TTAAA)31510620151062029Non coding
7. (GCAAA)31511362671136281Coding
8. (ATTTT)31512762071276221Non coding
9. (ATAAA)31514987481498762Non coding
10. (ATCAA)31516027141602728Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.