CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Prochlorococcus marinus str. MIT 9215 (NC_009840 1738791 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 0   Overlapping Compound : 1
Perfect      : 152     Density of SSR      : 1SSR/ 11.36 kb   Average length of SSR  : 13.11 bp
Coding      : 106     Non-Coding           : 33   Coding and Non-Coding : 14
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 3 54 79 8 6 152
IMPERFECT 18 81 754 939 141 82 2015
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (AATTA)315761830761844Coding
2. (TAATT)420979645979664Non coding
3. (TAATT)31511296761129690Non coding
4. (GCAAA)31511795421179556Coding
5. (GCTTT)31514800241480038Coding
6. (AGATG)31515139251513939Non coding
7. (ACATA)31516235311623545Coding
8. (ATTTG)42016647961664815Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.