CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Prochlorococcus marinus str. MIT 9312 (NC_007577 1709205 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 173     Density of SSR      : 1SSR/ 9.88 kb   Average length of SSR  : 13.23 bp
Coding      : 111     Non-Coding           : 50   Coding and Non-Coding : 12
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 6 5 64 78 10 10 173
IMPERFECT 16 89 769 906 128 70 1978
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TGGCGG)5301641316442Coding
2. (AAGCAA)318190245190262Coding
3. (CCAAAA)318216171216188Coding
4. (ATTGAA)318499754499771Coding
5. (TTCATT)318917820917837Coding
6. (ATATCA)318995163995180Coding
7. (GGCGGT)31810524231052440Coding
8. (AAAAAG)31811109391110956Coding
9. (TCCAAC)31815309621530979Coding
10. (AAAATT)31816046161604633Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.