CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Prochlorococcus marinus str. MIT 9312 (NC_007577 1709205 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 173     Density of SSR      : 1SSR/ 9.88 kb   Average length of SSR  : 13.23 bp
Coding      : 111     Non-Coding           : 50   Coding and Non-Coding : 12
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 6 5 64 78 10 10 173
IMPERFECT 16 89 769 906 128 70 1978
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TAAAT)315214595214609Coding-Non coding
2. (ATTTA)315755017755031Non coding
3. (AAATC)315799832799846Non coding
4. (AATTT)31510475761047590Non coding
5. (ATTTT)31510966171096631Coding
6. (ATTTT)31513060121306026Non coding
7. (TTTAA)42013940621394081Non coding
8. (GCTTT)31514526321452646Coding
9. (ATAAA)31515390481539062Non coding
10. (ACATA)31515939231593937Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.