CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Prochlorococcus marinus str. MIT 9515 (NC_008817 1704177 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 179     Density of SSR      : 1SSR/ 9.52 kb   Average length of SSR  : 13.12 bp
Coding      : 120     Non-Coding           : 50   Coding and Non-Coding : 9
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 12 6 60 89 5 7 179
IMPERFECT 22 93 836 896 148 69 2064
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CAATTG)4249886698889Coding
2. (ATTTTT)318176389176406Coding-Non coding
3. (AAAAAT)318279498279515Coding
4. (TTGTTT)530793340793369Coding
5. (TCAGAT)31814047141404731Coding
6. (AAATAG)31815266691526686Non coding
7. (TTGTTT)53015345721534601Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.