CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986 (NC_005072 1657991 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 173     Density of SSR      : 1SSR/ 9.58 kb   Average length of SSR  : 12.78 bp
Coding      : 107     Non-Coding           : 51   Coding and Non-Coding : 15
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 0 64 93 6 8 173
IMPERFECT 17 92 743 909 140 88 1989
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CAATTG)4248925489277Coding
2. (ATTTTT)318158988159005Coding-Non coding
3. (TGTTAA)318409147409164Coding
4. (AAGATC)318430172430189Coding
5. (CTAGAG)318974026974043Coding
6. (TCAAAA)31813218281321845Non coding
7. (CCTACT)31814797741479791Coding
8. (AAATAG)53014851221485151Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.