CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Pseudanabaena sp. PCC 7367 (NC_019701 4557047 bp)                                                               Show Primer       Download
Compound : 2     Perfect Compound : 2   Overlapping Compound : 0
Perfect      : 367     Density of SSR      : 1SSR/ 12.35 kb   Average length of SSR  : 13.48 bp
Coding      : 236     Non-Coding           : 118   Coding and Non-Coding : 15
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 121 187 24 34 367
IMPERFECT 1 82 1478 1542 195 169 3467
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TTAAG)4205658356602Non coding
2. (AATTA)315243037243051Non coding
3. (CCAAT)315375759375773Non coding
4. (AATTA)315561467561481Coding-Non coding
5. (TAAAT)315656870656884Non coding
6. (CGATG)42012895501289569Non coding
7. (ACTAA)31513572351357249Non coding
8. (AACCA)31513713711371385Coding
9. (GTTGG)31513985701398584Coding
10. (ATTGA)31514169921417006Non coding
11. (AATTA)31514744571474471Non coding
12. (GTTTT)31518000481800062Non coding
13. (TGCAA)31518312951831309Coding
14. (ATTGG)31523073132307327Non coding
15. (TTAAG)31526108042610818Coding-Non coding
16. (ACTTT)42026335282633547Non coding
17. (AATAA)31527831142783128Non coding
18. (ACCCA)31529306992930713Coding
19. (TTAAA)52531616393161663Coding-Non coding
20. (CCAGC)31532107133210727Coding
21. (AATCC)42033668093366828Non coding
22. (ATTTA)31533809883381002Non coding
23. (CTGGT)31534377893437803Coding
24. (CCAAG)31540271034027117Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.