CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Stanieria cyanosphaera PCC 7437 (NC_019748 5041210 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 406     Density of SSR      : 1SSR/ 12.39 kb   Average length of SSR  : 12.63 bp
Coding      : 313     Non-Coding           : 78   Coding and Non-Coding : 16
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 218 160 12 15 406
IMPERFECT 15 124 2507 1961 296 162 5065
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GTTGGG)318152734152751Coding
2. (TAAAAA)318809109809126Coding
3. (AGCACC)318932218932235Coding
4. (TTTCTT)31812004111200428Coding
5. (GTGATT)31815592181559235Coding
6. (GAAATG)42417853421785365Coding
7. (CAGAAA)31822002532200270Coding
8. (CAAAAT)31824329292432946Coding
9. (AATGGC)31829220742922091Coding
10. (TGCCGA)31832331863233203Coding
11. (TGACCA)31832380983238115Coding
12. (CTAATC)31834783203478337Coding
13. (TTTTTC)31842618834261900Non coding
14. (GGCAAT)42442709634270986Coding
15. (AGGTTT)31848955024895519Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.