CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Stanieria cyanosphaera PCC 7437 (NC_019748 5041210 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 406     Density of SSR      : 1SSR/ 12.39 kb   Average length of SSR  : 12.63 bp
Coding      : 313     Non-Coding           : 78   Coding and Non-Coding : 16
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 218 160 12 15 406
IMPERFECT 15 124 2507 1961 296 162 5065
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (AAATT)315293283293297Non coding
2. (TTAAT)315479527479541Coding
3. (TTTAA)315562913562927Coding-Non coding
4. (GTAAA)315677495677509Coding
5. (TTTTA)315950810950824Non coding
6. (TGATT)31521010362101050Coding
7. (TTGGG)31534118053411819Coding
8. (AAATT)31537032303703244Coding
9. (AAATA)31538764773876491Coding
10. (TTTAT)31542063004206314Coding-Non coding
11. (AAACC)31546500324650046Coding
12. (AAATT)31547664684766482Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.