CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. CC9311 (NC_008319 2606749 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 142     Density of SSR      : 1SSR/ 18.23 kb   Average length of SSR  : 13.37 bp
Coding      : 124     Non-Coding           : 14   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 2 73 50 6 9 142
IMPERFECT 3 68 944 677 69 37 1798
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GATATG)318158457158474Coding
2. (TGGTGA)318439174439191Coding
3. (TCTTCC)742625506625547Coding
4. (GCCACC)318954510954527Coding
5. (GGTAGT)31813731621373179Non coding
6. (GCATGA)42415505351550558Coding
7. (GGCAGA)31819256621925679Coding
8. (ACTGGG)31820585612058578Coding
9. (AGCGGC)31824424142442431Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.