CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. CC9311 (NC_008319 2606749 bp)                                                               Show Primer       Download
Compound : 1     Perfect Compound : 1   Overlapping Compound : 0
Perfect      : 142     Density of SSR      : 1SSR/ 18.23 kb   Average length of SSR  : 13.37 bp
Coding      : 124     Non-Coding           : 14   Coding and Non-Coding : 5
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 2 2 73 50 6 9 142
IMPERFECT 3 68 944 677 69 37 1798
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CCAGC)31599779991Coding
2. (GCGCG)3154198241996Coding
3. (GATCA)315363122363136Coding-Non coding
4. (TTCTT)315503479503493Coding
5. (GAGCT)31514192061419220Coding
6. (GCGGC)31520413412041355Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.