CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. CC9605 (NC_007516 2510660 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 173     Density of SSR      : 1SSR/ 14.51 kb   Average length of SSR  : 12.65 bp
Coding      : 161     Non-Coding           : 11   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 138 22 4 9 173
IMPERFECT 1 52 1467 606 88 66 2280
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CCAACC)3181279812815Coding
2. (TCGCCG)318320038320055Coding
3. (GCTGAC)318371058371075Coding
4. (CGCCAG)318773551773568Coding
5. (TTCATG)424896436896459Non coding
6. (CAGGCC)31815119721511989Coding
7. (AGCCAA)31816134401613457Non coding
8. (TCGGCA)31820051692005186Coding
9. (AGCACC)31821877782187795Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.