CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
HOME ABOUT DATABASE ADVANCED SEARCH TUTORIAL STATISTICS CONTACT
       Organism: Synechococcus sp. CC9902 (NC_007513 2234829 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 123     Density of SSR      : 1SSR/ 18.17 kb   Average length of SSR  : 12.44 bp
Coding      : 108     Non-Coding           : 13   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 86 29 6 2 123
IMPERFECT 0 42 844 532 51 32 1501
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (ATCCG)315849719849733Coding
2. (CTGGG)315980468980482Coding
3. (TGAGC)315991167991181Coding
4. (TCAAA)31515146381514652Coding
5. (CCAAG)31517460251746039Coding
6. (AATCC)31518373991837413Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.