CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. JA-2-3B'a(2-13) (NC_007776 3046683 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 170     Density of SSR      : 1SSR/ 17.92 kb   Average length of SSR  : 12.48 bp
Coding      : 154     Non-Coding           : 13   Coding and Non-Coding : 3
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 1 131 29 7 2 170
IMPERFECT 0 96 1424 656 115 94 2385
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GGGCA)315192653192667Coding
2. (CCCAC)315301602301616Coding
3. (ATTGA)315938142938156Non coding
4. (AACTC)31516615071661521Non coding
5. (CGGGG)31518759801875994Coding
6. (CCAAC)31521814362181450Coding
7. (GATGG)31527162982716312Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.