CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. PCC 6312 (NC_019680 3697277 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 160     Density of SSR      : 1SSR/ 23.11 kb   Average length of SSR  : 12.59 bp
Coding      : 132     Non-Coding           : 27   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 3 78 64 11 4 160
IMPERFECT 0 70 941 747 101 75 1934
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TGAAC)315802507802521Coding
2. (AGCCA)31512679671267981Coding
3. (GGCTG)31516181421618156Coding
4. (GCCAG)31518157771815791Coding
5. (TTGGG)31521460472146061Coding
6. (CTGCT)31524279232427937Coding
7. (GACCC)31528881352888149Coding
8. (CCGGG)31530642793064293Coding
9. (GGGGT)31531593523159366Coding
10. (GTTTG)31533572373357251Coding
11. (GGATT)31536903263690340Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.