CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. RCC307 (NC_009482 2224915 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 242     Density of SSR      : 1SSR/ 9.19 kb   Average length of SSR  : 12.74 bp
Coding      : 230     Non-Coding           : 12   Coding and Non-Coding : 0
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 184 42 5 9 242
IMPERFECT 0 59 1751 598 75 63 2546
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GCTGCG)318410202410219Coding
2. (GCCCAG)318592435592452Coding
3. (GCCATG)318607986608003Coding
4. (GGGGCT)318886097886114Coding
5. (TCGGTG)318923583923600Coding
6. (TGAGGC)31812950141295031Coding
7. (CCGGAG)31818641471864164Coding
8. (CCTTGG)31819343731934390Coding
9. (ACCTCC)42420615702061593Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.