CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Synechococcus sp. WH 7803 (NC_009481 2366981 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 174     Density of SSR      : 1SSR/ 13.6 kb   Average length of SSR  : 12.72 bp
Coding      : 164     Non-Coding           : 8   Coding and Non-Coding : 2
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 2 117 41 3 11 174
IMPERFECT 0 73 1272 605 73 52 2075
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (CCTGCT)318154985155002Coding
2. (GGTGCA)318191912191929Coding
3. (GGGCTT)318545433545450Coding
4. (TACCAC)318810550810567Coding
5. (ACCACG)31813051811305198Coding
6. (GGCGGT)31813902361390253Coding
7. (TGCTGG)31815824131582430Coding
8. (CCATGT)42418988931898916Coding
9. (GCCAAG)31821726652172682Coding
10. (GAAACA)31822160552216072Coding
11. (ATGAAG)31823564602356477Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.