CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Thermosynechococcus elongatus BP-1 (NC_004113 2593858 bp)                                                               Show Primer       Download
Compound : 0     Perfect Compound : 0   Overlapping Compound : 0
Perfect      : 73     Density of SSR      : 1SSR/ 35.53 kb   Average length of SSR  : 12.33 bp
Coding      : 65     Non-Coding           : 7   Coding and Non-Coding : 1
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 0 0 45 25 1 2 73
IMPERFECT 0 39 880 448 60 47 1474
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (GCGG)3126832768338Coding
2. (TCAT)312114285114296Coding-Non coding
3. (TACC)312209960209971Coding
4. (CGGC)312226345226356Coding
5. (AACC)312330345330356Coding
6. (CCAG)312453638453649Coding
7. (ATTA)312615391615402Non coding
8. (ACCG)312650974650985Coding
9. (GCTG)312751114751125Coding
10. (CTAT)31210323891032400Coding
11. (GCAA)31212981551298166Coding
12. (AGCC)31214765911476602Coding
13. (CGCC)31215509811550992Coding
14. (CCCT)31215885201588531Coding
15. (TGAG)31216437661643777Coding
16. (ACCC)31217122611712272Coding
17. (ACCA)31217784161778427Coding
18. (AAAT)31219249981925009Non coding
19. (GAAG)31220361112036122Non coding
20. (CTGC)31220419142041925Coding
21. (CCAC)31220776062077617Coding
22. (TTGA)31220989252098936Non coding
23. (GTGA)31221319142131925Coding
24. (AAAT)31222054092205420Non coding
25. (TTGA)31222424762242487Coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.