CyanoSat: A Database of Cyanobacterial Perfect and Imperfect Microsatellites
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       Organism: Trichodesmium erythraeum IMS101 (NC_008312 7750109 bp)                                                               Show Primer       Download
Compound : 2     Perfect Compound : 1   Overlapping Compound : 1
Perfect      : 559     Density of SSR      : 1SSR/ 13.81 kb   Average length of SSR  : 13.7 bp
Coding      : 257     Non-Coding           : 291   Coding and Non-Coding : 13
REPEATMONODITRITETRAPENTAHEXATOTAL
PERFECT 5 10 198 275 23 48 559
IMPERFECT 63 515 3565 3024 372 357 7896
Perfect SSRs
S. No.MOTIFLENGTHSTARTENDREGION
1. (TA)612186173186184Non coding
2. (TA)71417279761727989Non coding
3. (TA)61217581781758189Coding
4. (AT)61239382353938246Non coding
5. (TA)81639528203952835Non coding
6. (TA)61240336344033645Non coding
7. (TA)61254642965464307Non coding
8. (AT)61261108806110891Non coding
9. (TA)61262723856272396Coding
10. (TA)61277369117736922Non coding
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71                                                      Best viewed at 1280 x 768.