| |
Organism:
Trichodesmium erythraeum IMS101
|
(NC_008312 , 7750109 bp)
|
|
Show Primer
Download
|
|
Compound
:
2
|
Perfect Compound
:
1
|
Overlapping Compound
:
1
|
|
Perfect
:
559
|
Density of SSR
:
1SSR/
13.81
kb
|
Average length of SSR
:
13.7
bp
|
|
Coding
:
257
|
Non-Coding
:
291
|
Coding and Non-Coding
:
13
|
|
Perfect SSRs
| S. No. | MOTIF | LENGTH | START | END | REGION |
|
1.
| (TAT)4 | 12 | 5431 | 5442 | Non coding |
|
2.
| (GAA)6 | 18 | 20636 | 20653 | Coding |
|
3.
| (CTTAA)3 | 15 | 27928 | 27942 | Non coding |
|
4.
| (TTAT)3 | 12 | 53597 | 53608 | Non coding |
|
5.
| (TAA)4 | 12 | 63690 | 63701 | Non coding |
|
6.
| (TTAA)3 | 12 | 70510 | 70521 | Non coding |
|
7.
| (ATCAAG)3 | 18 | 94405 | 94422 | Coding |
|
8.
| (CAG)4 | 12 | 95893 | 95904 | Coding |
|
9.
| (AGT)4 | 12 | 119474 | 119485 | Coding |
|
10.
| (AAAAT)3 | 15 | 156767 | 156781 | Coding |
|
11.
| (ATT)6 | 18 | 163139 | 163156 | Non coding |
|
12.
| (GTT)4 | 12 | 180731 | 180742 | Coding |
|
13.
| (TA)6 | 12 | 186173 | 186184 | Non coding |
|
14.
| (TAT)4 | 12 | 187665 | 187676 | Coding |
|
15.
| (TTC)4 | 12 | 210816 | 210827 | Coding |
|
16.
| (TGA)4 | 12 | 218142 | 218153 | Coding |
|
17.
| (AATA)3 | 12 | 233478 | 233489 | Non coding |
|
18.
| (AACT)3 | 12 | 233777 | 233788 | Non coding |
|
19.
| (TTA)6 | 18 | 234109 | 234126 | Non coding |
|
20.
| (C)12 | 12 | 275280 | 275291 | Non coding |
|
21.
| (GCA)4 | 12 | 286082 | 286093 | Coding |
|
22.
| (TTAT)3 | 12 | 289856 | 289867 | Non coding |
|
23.
| (TATT)3 | 12 | 297410 | 297421 | Coding |
|
24.
| (TAAT)3 | 12 | 345074 | 345085 | Non coding |
|
25.
| (AAT)4 | 12 | 347590 | 347601 | Coding |
|
26.
| (ATTA)3 | 12 | 367613 | 367624 | Non coding |
|
27.
| (TTTG)3 | 12 | 371297 | 371308 | Coding |
|
28.
| (AAT)4 | 12 | 381837 | 381848 | Non coding |
|
29.
| (AGAT)3 | 12 | 490874 | 490885 | Non coding |
|
30.
| (AGA)4 | 12 | 495310 | 495321 | Coding |
|
31.
| (CTTA)3 | 12 | 502332 | 502343 | Non coding |
|
32.
| (ATTA)3 | 12 | 512500 | 512511 | Non coding |
|
33.
| (ATTA)3 | 12 | 512626 | 512637 | Non coding |
|
34.
| (AAGA)5 | 20 | 518683 | 518702 | Non coding |
|
35.
| (AAGA)3 | 12 | 520576 | 520587 | Coding |
|
36.
| (TGGA)3 | 12 | 535256 | 535267 | Coding |
|
37.
| (TAA)4 | 12 | 548209 | 548220 | Coding |
|
38.
| (TGC)4 | 12 | 568230 | 568241 | Coding |
|
39.
| (AAAC)3 | 12 | 574387 | 574398 | Coding |
|
40.
| (AATA)3 | 12 | 596145 | 596156 | Coding |
|
41.
| (TTC)4 | 12 | 649191 | 649202 | Coding |
|
42.
| (CTTG)3 | 12 | 676502 | 676513 | Coding |
|
43.
| (AAT)4 | 12 | 684433 | 684444 | Coding |
|
44.
| (ATCATG)3 | 18 | 695483 | 695500 | Coding |
|
45.
| (TTTA)6 | 24 | 704951 | 704974 | Non coding |
|
46.
| (TTTA)3 | 12 | 706366 | 706377 | Non coding |
|
47.
| (TAA)4 | 12 | 715847 | 715858 | Non coding |
|
48.
| (TTCT)3 | 12 | 730299 | 730310 | Coding |
|
49.
| (TGG)4 | 12 | 730484 | 730495 | Coding |
|
50.
| (TGG)4 | 12 | 732591 | 732602 | Coding |
|
51.
| (TTCT)3 | 12 | 734513 | 734524 | Coding |
|
52.
| (TAAA)3 | 12 | 738206 | 738217 | Non coding |
|
53.
| (AAC)4 | 12 | 753094 | 753105 | Coding |
|
54.
| (AAGA)3 | 12 | 754058 | 754069 | Coding |
|
55.
| (ACG)4 | 12 | 772197 | 772208 | Coding |
|
56.
| (CGA)7 | 21 | 772753 | 772773 | Coding |
|
57.
| (TGG)4 | 12 | 776280 | 776291 | Coding |
|
58.
| (AGGTAA)3 | 18 | 794218 | 794235 | Coding |
|
59.
| (AGTA)3 | 12 | 795579 | 795590 | Non coding |
|
60.
| (ATTT)3 | 12 | 806322 | 806333 | Non coding |
|
61.
| (TAAT)3 | 12 | 841858 | 841869 | Coding-Non coding |
|
62.
| (AATA)3 | 12 | 842044 | 842055 | Non coding |
|
63.
| (AATA)3 | 12 | 843284 | 843295 | Coding |
|
64.
| (TAAA)3 | 12 | 849056 | 849067 | Non coding |
|
65.
| (ATTT)3 | 12 | 949085 | 949096 | Coding |
|
66.
| (ACC)4 | 12 | 953306 | 953317 | Coding |
|
67.
| (AGC)4 | 12 | 956525 | 956536 | Coding |
|
68.
| (GTTGAG)3 | 18 | 969820 | 969837 | Coding |
|
69.
| (ATG)4 | 12 | 972449 | 972460 | Coding |
|
70.
| (ATG)4 | 12 | 973085 | 973096 | Coding |
|
71.
| (TAAT)3 | 12 | 1047200 | 1047211 | Non coding |
|
72.
| (TACT)3 | 12 | 1051383 | 1051394 | Non coding |
|
73.
| (CAG)4 | 12 | 1052617 | 1052628 | Coding |
|
74.
| (TATT)3 | 12 | 1059607 | 1059618 | Non coding |
|
75.
| (GTTGAG)3 | 18 | 1070984 | 1071001 | Coding |
|
76.
| (AATT)3 | 12 | 1109326 | 1109337 | Non coding |
|
77.
| (TAAA)3 | 12 | 1116817 | 1116828 | Non coding |
|
78.
| (AATT)3 | 12 | 1123015 | 1123026 | Non coding |
|
79.
| (TAT)4 | 12 | 1144707 | 1144718 | Non coding |
|
80.
| (TAA)4 | 12 | 1150044 | 1150055 | Non coding |
|
81.
| (TAAG)3 | 12 | 1168331 | 1168342 | Non coding |
|
82.
| (CAAC)4 | 16 | 1175804 | 1175819 | Coding |
|
83.
| (GAA)4 | 12 | 1180922 | 1180933 | Coding |
|
84.
| (AAAT)3 | 12 | 1197325 | 1197336 | Coding-Non coding |
|
85.
| (TTAA)3 | 12 | 1219292 | 1219303 | Non coding |
|
86.
| (ATTT)3 | 12 | 1230831 | 1230842 | Non coding |
|
87.
| (ACT)4 | 12 | 1241472 | 1241483 | Coding |
|
88.
| (TAT)4 | 12 | 1245472 | 1245483 | Non coding |
|
89.
| (TTAA)5 | 20 | 1272733 | 1272752 | Non coding |
|
90.
| (AATT)3 | 12 | 1291484 | 1291495 | Non coding |
|
91.
| (TTTC)3 | 12 | 1304272 | 1304283 | Coding |
|
92.
| (TTAA)3 | 12 | 1305453 | 1305464 | Non coding |
|
93.
| (ATT)4 | 12 | 1320070 | 1320081 | Non coding |
|
94.
| (TATG)3 | 12 | 1394055 | 1394066 | Non coding |
|
95.
| (TTA)4 | 12 | 1402599 | 1402610 | Non coding |
|
96.
| (TAC)4 | 12 | 1407561 | 1407572 | Non coding |
|
97.
| (TTTA)3 | 12 | 1418477 | 1418488 | Coding |
|
98.
| (AACT)3 | 12 | 1429839 | 1429850 | Non coding |
|
99.
| (AACT)3 | 12 | 1430076 | 1430087 | Non coding |
|
100.
| (AATC)3 | 12 | 1448578 | 1448589 | Non coding |
|
101.
| (TTTA)3 | 12 | 1452212 | 1452223 | Non coding |
|
102.
| (AAGTCC)3 | 18 | 1457730 | 1457747 | Coding |
|
103.
| (TATTT)3 | 15 | 1474318 | 1474332 | Non coding |
|
104.
| (TTGA)3 | 12 | 1474527 | 1474538 | Non coding |
|
105.
| (TAATA)3 | 15 | 1478103 | 1478117 | Non coding |
|
106.
| (TAT)4 | 12 | 1483415 | 1483426 | Coding |
|
107.
| (AAGA)3 | 12 | 1508715 | 1508726 | Non coding |
|
108.
| (TTA)4 | 12 | 1518029 | 1518040 | Non coding |
|
109.
| (CAAA)3 | 12 | 1520950 | 1520961 | Coding |
|
110.
| (TAAT)3 | 12 | 1546838 | 1546849 | Non coding |
|
111.
| (AATC)3 | 12 | 1553309 | 1553320 | Coding-Non coding |
|
112.
| (CCA)5 | 15 | 1579871 | 1579885 | Coding |
|
113.
| (TATT)3 | 12 | 1626172 | 1626183 | Coding |
|
114.
| (TTAT)3 | 12 | 1657683 | 1657694 | Non coding |
|
115.
| (ATT)4 | 12 | 1660492 | 1660503 | Non coding |
|
116.
| (TTACCA)10 | 60 | 1684789 | 1684848 | Coding |
|
117.
| (CAG)4 | 12 | 1687133 | 1687144 | Coding |
|
118.
| (TAAGTC)3 | 18 | 1703905 | 1703922 | Coding |
|
119.
| (ACT)4 | 12 | 1719195 | 1719206 | Coding |
|
120.
| (CAA)4 | 12 | 1721660 | 1721671 | Coding |
|
121.
| (TA)7 | 14 | 1727976 | 1727989 | Non coding |
|
122.
| (ACTG)3 | 12 | 1731416 | 1731427 | Coding |
|
123.
| (TAT)4 | 12 | 1737767 | 1737778 | Non coding |
|
124.
| (AAC)4 | 12 | 1752795 | 1752806 | Coding |
|
125.
| (TA)6 | 12 | 1758178 | 1758189 | Coding |
|
126.
| (TAATT)3 | 15 | 1774613 | 1774627 | Non coding |
|
127.
| (CTG)5 | 15 | 1782537 | 1782551 | Coding |
|
128.
| (TTTAT)3 | 15 | 1795350 | 1795364 | Non coding |
|
129.
| (A)12 | 12 | 1803037 | 1803048 | Coding |
|
130.
| (ACTT)4 | 16 | 1803543 | 1803558 | Non coding |
|
131.
| (TATT)3 | 12 | 1809791 | 1809802 | Non coding |
|
132.
| (ACT)4 | 12 | 1828177 | 1828188 | Non coding |
|
133.
| (TTTA)3 | 12 | 1836104 | 1836115 | Non coding |
|
134.
| (AAT)4 | 12 | 1839335 | 1839346 | Non coding |
|
135.
| (AATA)3 | 12 | 1849689 | 1849700 | Coding |
|
136.
| (CAA)4 | 12 | 1880496 | 1880507 | Coding |
|
137.
| (TATG)3 | 12 | 1890396 | 1890407 | Non coding |
|
138.
| (TTAT)3 | 12 | 1908620 | 1908631 | Non coding |
|
139.
| (TAAT)3 | 12 | 1913750 | 1913761 | Non coding |
|
140.
| (AAAG)3 | 12 | 1924141 | 1924152 | Non coding |
|
141.
| (AAAT)3 | 12 | 1956439 | 1956450 | Non coding |
|
142.
| (ATTT)3 | 12 | 1970812 | 1970823 | Non coding |
|
143.
| (AGC)4 | 12 | 2001620 | 2001631 | Coding |
|
144.
| (TAA)4 | 12 | 2004851 | 2004862 | Non coding |
|
145.
| (CATT)3 | 12 | 2010645 | 2010656 | Non coding |
|
146.
| (AAAG)3 | 12 | 2028651 | 2028662 | Non coding |
|
147.
| (TTTA)3 | 12 | 2069905 | 2069916 | Non coding |
|
148.
| (TTAA)3 | 12 | 2089712 | 2089723 | Non coding |
|
149.
| (ATA)5 | 15 | 2120905 | 2120919 | Non coding |
|
150.
| (AATT)3 | 12 | 2139649 | 2139660 | Coding |
|
151.
| (ATG)4 | 12 | 2149415 | 2149426 | Non coding |
|
152.
| (CTTTC)3 | 15 | 2176602 | 2176616 | Non coding |
|
153.
| (AGT)4 | 12 | 2184098 | 2184109 | Coding |
|
154.
| (AAGA)3 | 12 | 2239444 | 2239455 | Non coding |
|
155.
| (CAG)4 | 12 | 2254673 | 2254684 | Coding |
|
156.
| (TATT)3 | 12 | 2300629 | 2300640 | Coding-Non coding |
|
157.
| (TAAT)4 | 16 | 2315030 | 2315045 | Non coding |
|
158.
| (GCA)5 | 15 | 2322273 | 2322287 | Coding |
|
159.
| (AATT)3 | 12 | 2335430 | 2335441 | Non coding |
|
160.
| (CAA)4 | 12 | 2357807 | 2357818 | Coding |
|
161.
| (TAAA)3 | 12 | 2375045 | 2375056 | Coding |
|
162.
| (TAAT)3 | 12 | 2389670 | 2389681 | Non coding |
|
163.
| (AGC)4 | 12 | 2398848 | 2398859 | Coding |
|
164.
| (AAGT)3 | 12 | 2401306 | 2401317 | Non coding |
|
165.
| (TAAT)3 | 12 | 2406708 | 2406719 | Non coding |
|
166.
| (ATAA)3 | 12 | 2409380 | 2409391 | Non coding |
|
167.
| (CAC)4 | 12 | 2419499 | 2419510 | Coding |
|
168.
| (ATAA)3 | 12 | 2432270 | 2432281 | Non coding |
|
169.
| (CAACTA)3 | 18 | 2438972 | 2438989 | Coding |
|
170.
| (TGA)7 | 21 | 2443980 | 2444000 | Coding |
|
171.
| (TGATAT)3 | 18 | 2473087 | 2473104 | Coding |
|
172.
| (ATTTTC)3 | 18 | 2554178 | 2554195 | Coding |
|
173.
| (ATTT)3 | 12 | 2556480 | 2556491 | Non coding |
|
174.
| (ATAA)3 | 12 | 2558430 | 2558441 | Non coding |
|
175.
| (TTG)4 | 12 | 2624253 | 2624264 | Coding |
|
176.
| (TCA)4 | 12 | 2640397 | 2640408 | Coding |
|
177.
| (TTTTTC)3 | 18 | 2646994 | 2647011 | Coding |
|
178.
| (CCTCAA)3 | 18 | 2701203 | 2701220 | Coding |
|
179.
| (CCTCAA)3 | 18 | 2704380 | 2704397 | Coding |
|
180.
| (TTA)5 | 15 | 2720944 | 2720958 | Coding |
|
181.
| (TTA)5 | 15 | 2726488 | 2726502 | Coding |
|
182.
| (GAAG)3 | 12 | 2729797 | 2729808 | Coding |
|
183.
| (TTA)4 | 12 | 2740033 | 2740044 | Non coding |
|
184.
| (TATT)3 | 12 | 2756499 | 2756510 | Non coding |
|
185.
| (TTAT)3 | 12 | 2778371 | 2778382 | Non coding |
|
186.
| (AAAACT)6 | 36 | 2787809 | 2787844 | Non coding |
|
187.
| (ATC)5 | 15 | 2790357 | 2790371 | Coding |
|
188.
| (CCA)5 | 15 | 2796540 | 2796554 | Coding |
|
189.
| (TATT)3 | 12 | 2798039 | 2798050 | Non coding |
|
190.
| (TCC)4 | 12 | 2821603 | 2821614 | Coding |
|
191.
| (TTTA)3 | 12 | 2836316 | 2836327 | Non coding |
|
192.
| (ATC)4 | 12 | 2840248 | 2840259 | Coding |
|
193.
| (TAA)4 | 12 | 2852587 | 2852598 | Non coding |
|
194.
| (ATG)6 | 18 | 2854977 | 2854994 | Non coding |
|
195.
| (TTA)4 | 12 | 2859661 | 2859672 | Non coding |
|
196.
| (ATTAAC)3 | 18 | 2860505 | 2860522 | Non coding |
|
197.
| (GAT)8 | 24 | 2883173 | 2883196 | Coding |
|
198.
| (TAAT)3 | 12 | 2886575 | 2886586 | Non coding |
|
199.
| (ATTA)3 | 12 | 2918569 | 2918580 | Coding-Non coding |
|
200.
| (AAGA)3 | 12 | 2924633 | 2924644 | Coding |
|
201.
| (TTAAGG)3 | 18 | 2981348 | 2981365 | Non coding |
|
202.
| (TGC)4 | 12 | 2983427 | 2983438 | Coding |
|
203.
| (TTTA)3 | 12 | 3007829 | 3007840 | Non coding |
|
204.
| (AATA)4 | 16 | 3022980 | 3022995 | Non coding |
|
205.
| (TCA)4 | 12 | 3037902 | 3037913 | Non coding |
|
206.
| (AATA)3 | 12 | 3042357 | 3042368 | Non coding |
|
207.
| (TTAT)3 | 12 | 3056274 | 3056285 | Non coding |
|
208.
| (GGAATA)3 | 18 | 3076605 | 3076622 | Coding |
|
209.
| (TATTA)3 | 15 | 3080291 | 3080305 | Non coding |
|
210.
| (GGACTT)5 | 30 | 3087240 | 3087269 | Coding |
|
211.
| (TTGGAC)3 | 18 | 3087298 | 3087315 | Coding |
|
212.
| (TTAA)3 | 12 | 3091985 | 3091996 | Non coding |
|
213.
| (CTAA)3 | 12 | 3092206 | 3092217 | Coding |
|
214.
| (AAATA)3 | 15 | 3129176 | 3129190 | Non coding |
|
215.
| (GTAA)3 | 12 | 3131010 | 3131021 | Coding |
|
216.
| (TTA)4 | 12 | 3174342 | 3174353 | Coding |
|
217.
| (TTTA)3 | 12 | 3208075 | 3208086 | Coding |
|
218.
| (GCTG)3 | 12 | 3211083 | 3211094 | Coding |
|
219.
| (CAG)4 | 12 | 3227182 | 3227193 | Coding |
|
220.
| (TTAA)3 | 12 | 3229013 | 3229024 | Non coding |
|
221.
| (TAAT)3 | 12 | 3239666 | 3239677 | Coding-Non coding |
|
222.
| (ATATAA)3 | 18 | 3255793 | 3255810 | Coding |
|
223.
| (T)12 | 12 | 3270483 | 3270494 | Coding |
|
224.
| (AGATT)3 | 15 | 3271759 | 3271773 | Non coding |
|
225.
| (TAAT)3 | 12 | 3272247 | 3272258 | Non coding |
|
226.
| (TTTA)4 | 16 | 3278227 | 3278242 | Non coding |
|
227.
| (TAT)4 | 12 | 3290824 | 3290835 | Coding |
|
228.
| (AATC)3 | 12 | 3311665 | 3311676 | Non coding |
|
229.
| (ATA)5 | 15 | 3317542 | 3317556 | Non coding |
|
230.
| (AAGAAA)3 | 18 | 3329010 | 3329027 | Coding |
|
231.
| (TTAA)3 | 12 | 3343930 | 3343941 | Non coding |
|
232.
| (TAA)4 | 12 | 3365964 | 3365975 | Non coding |
|
233.
| (ATAA)3 | 12 | 3370708 | 3370719 | Coding |
|
234.
| (ATT)4 | 12 | 3371737 | 3371748 | Coding |
|
235.
| (ATAA)3 | 12 | 3383089 | 3383100 | Coding |
|
236.
| (TTAT)3 | 12 | 3388323 | 3388334 | Coding |
|
237.
| (AAT)4 | 12 | 3394661 | 3394672 | Non coding |
|
238.
| (TAA)4 | 12 | 3418801 | 3418812 | Non coding |
|
239.
| (CTG)4 | 12 | 3423509 | 3423520 | Coding |
|
240.
| (TAA)4 | 12 | 3425523 | 3425534 | Non coding |
|
241.
| (TTA)4 | 12 | 3426747 | 3426758 | Non coding |
|
242.
| (TGTA)3 | 12 | 3442429 | 3442440 | Coding |
|
243.
| (TGTA)3 | 12 | 3444656 | 3444667 | Coding |
|
244.
| (AAT)4 | 12 | 3449554 | 3449565 | Non coding |
|
245.
| (CTG)4 | 12 | 3486302 | 3486313 | Coding |
|
246.
| (AGC)4 | 12 | 3534285 | 3534296 | Coding |
|
247.
| (TTC)4 | 12 | 3569600 | 3569611 | Coding |
|
248.
| (TAC)6 | 18 | 3571079 | 3571096 | Non coding |
|
249.
| (AATTA)3 | 15 | 3579025 | 3579039 | Non coding |
|
250.
| (AAGA)3 | 12 | 3599987 | 3599998 | Non coding |
|
251.
| (AATT)5 | 20 | 3607860 | 3607879 | Non coding |
|
252.
| (ATT)4 | 12 | 3613052 | 3613063 | Non coding |
|
253.
| (TTTA)3 | 12 | 3627664 | 3627675 | Non coding |
|
254.
| (TTTA)3 | 12 | 3627748 | 3627759 | Non coding |
|
255.
| (TTTA)3 | 12 | 3627832 | 3627843 | Non coding |
|
256.
| (AGAA)3 | 12 | 3669329 | 3669340 | Coding |
|
257.
| (TTCTT)3 | 15 | 3692550 | 3692564 | Coding |
|
258.
| (TTTA)3 | 12 | 3697411 | 3697422 | Coding |
|
259.
| (GGT)6 | 18 | 3740139 | 3740156 | Coding |
|
260.
| (AGAA)3 | 12 | 3804419 | 3804430 | Coding |
|
261.
| (AAAT)3 | 12 | 3825551 | 3825562 | Non coding |
|
262.
| (TATT)3 | 12 | 3858224 | 3858235 | Non coding |
|
263.
| (TAT)4 | 12 | 3862883 | 3862894 | Non coding |
|
264.
| (AAGA)3 | 12 | 3884017 | 3884028 | Non coding |
|
265.
| (ATTA)4 | 16 | 3900683 | 3900698 | Non coding |
|
266.
| (TTTA)3 | 12 | 3902519 | 3902530 | Coding |
|
267.
| (TAA)4 | 12 | 3903405 | 3903416 | Non coding |
|
268.
| (TTA)5 | 15 | 3908545 | 3908559 | Coding |
|
269.
| (TATT)3 | 12 | 3927238 | 3927249 | Non coding |
|
270.
| (AT)6 | 12 | 3938235 | 3938246 | Non coding |
|
271.
| (TAAT)3 | 12 | 3938789 | 3938800 | Non coding |
|
272.
| (TA)8 | 16 | 3952820 | 3952835 | Non coding |
|
273.
| (CAA)4 | 12 | 3958294 | 3958305 | Coding |
|
274.
| (TTAA)4 | 16 | 3966860 | 3966875 | Non coding |
|
275.
| (TTAC)3 | 12 | 3992999 | 3993010 | Non coding |
|
276.
| (CACCAG)3 | 18 | 3997004 | 3997021 | Coding |
|
277.
| (CAACAC)6 | 36 | 4006676 | 4006711 | Coding |
|
278.
| (CAACAC)5 | 30 | 4006718 | 4006747 | Coding |
|
279.
| (AATT)3 | 12 | 4026623 | 4026634 | Non coding |
|
280.
| (TA)6 | 12 | 4033634 | 4033645 | Non coding |
|
281.
| (TTTG)3 | 12 | 4053870 | 4053881 | Non coding |
|
282.
| (ACGGA)6 | 30 | 4071387 | 4071416 | Non coding |
|
283.
| (AAT)4 | 12 | 4073242 | 4073253 | Coding |
|
284.
| (GTTT)3 | 12 | 4082663 | 4082674 | Coding |
|
285.
| (CTT)5 | 15 | 4092130 | 4092144 | Coding |
|
286.
| (ATTA)3 | 12 | 4098157 | 4098168 | Non coding |
|
287.
| (AGAA)3 | 12 | 4101401 | 4101412 | Coding |
|
288.
| (CTTT)3 | 12 | 4143454 | 4143465 | Coding |
|
289.
| (AAAG)3 | 12 | 4150012 | 4150023 | Coding |
|
290.
| (CTTT)3 | 12 | 4150638 | 4150649 | Non coding |
|
291.
| (TAT)4 | 12 | 4164139 | 4164150 | Coding |
|
292.
| (AAAT)3 | 12 | 4164266 | 4164277 | Coding |
|
293.
| (AAAT)5 | 20 | 4165217 | 4165236 | Non coding |
|
294.
| (AATA)3 | 12 | 4172351 | 4172362 | Non coding |
|
295.
| (AAG)4 | 12 | 4184786 | 4184797 | Coding |
|
296.
| (TTA)4 | 12 | 4264306 | 4264317 | Non coding |
|
297.
| (AATA)3 | 12 | 4270473 | 4270484 | Coding-Non coding |
|
298.
| (TTATCA)3 | 18 | 4292560 | 4292577 | Coding |
|
299.
| (ACCATT)3 | 18 | 4296691 | 4296708 | Coding |
|
300.
| (TTTC)3 | 12 | 4300499 | 4300510 | Coding |
|
301.
| (AAAG)3 | 12 | 4329802 | 4329813 | Non coding |
|
302.
| (TTG)4 | 12 | 4340640 | 4340651 | Coding |
|
303.
| (TTTG)3 | 12 | 4342817 | 4342828 | Coding |
|
304.
| (TAA)4 | 12 | 4344039 | 4344050 | Non coding |
|
305.
| (TAT)4 | 12 | 4345293 | 4345304 | Non coding |
|
306.
| (TTC)4 | 12 | 4351631 | 4351642 | Coding |
|
307.
| (GAT)4 | 12 | 4373224 | 4373235 | Coding |
|
308.
| (GAT)4 | 12 | 4374154 | 4374165 | Coding |
|
309.
| (TAAT)3 | 12 | 4385310 | 4385321 | Non coding |
|
310.
| (CCAC)3 | 12 | 4417040 | 4417051 | Coding |
|
311.
| (ATT)6 | 18 | 4418129 | 4418146 | Non coding |
|
312.
| (AATG)3 | 12 | 4427645 | 4427656 | Coding-Non coding |
|
313.
| (TAAT)3 | 12 | 4473195 | 4473206 | Non coding |
|
314.
| (TTAT)3 | 12 | 4495856 | 4495867 | Non coding |
|
315.
| (ACATT)3 | 15 | 4501214 | 4501228 | Non coding |
|
316.
| (TTTAT)3 | 15 | 4591981 | 4591995 | Coding-Non coding |
|
317.
| (AATA)3 | 12 | 4594377 | 4594388 | Coding |
|
318.
| (TTA)4 | 12 | 4598319 | 4598330 | Non coding |
|
319.
| (CAC)4 | 12 | 4658069 | 4658080 | Coding |
|
320.
| (GTTGCT)3 | 18 | 4665687 | 4665704 | Coding |
|
321.
| (AGC)4 | 12 | 4666076 | 4666087 | Coding |
|
322.
| (TTC)4 | 12 | 4666367 | 4666378 | Coding |
|
323.
| (CTGC)3 | 12 | 4687744 | 4687755 | Non coding |
|
324.
| (AAAAAT)3 | 18 | 4701526 | 4701543 | Non coding |
|
325.
| (AAAT)3 | 12 | 4715439 | 4715450 | Non coding |
|
326.
| (TTAT)3 | 12 | 4727424 | 4727435 | Non coding |
|
327.
| (TAA)4 | 12 | 4734264 | 4734275 | Non coding |
|
328.
| (CAA)4 | 12 | 4811582 | 4811593 | Non coding |
|
329.
| (TAA)4 | 12 | 4819917 | 4819928 | Non coding |
|
330.
| (TCT)4 | 12 | 4828198 | 4828209 | Coding |
|
331.
| (GAAA)3 | 12 | 4833335 | 4833346 | Non coding |
|
332.
| (TTCT)3 | 12 | 4837325 | 4837336 | Coding |
|
333.
| (TTAA)3 | 12 | 4844682 | 4844693 | Non coding |
|
334.
| (TATT)3 | 12 | 4856686 | 4856697 | Non coding |
|
335.
| (TTAA)3 | 12 | 4865512 | 4865523 | Non coding |
|
336.
| (AAT)4 | 12 | 4875780 | 4875791 | Coding |
|
337.
| (ATTA)3 | 12 | 4876228 | 4876239 | Non coding |
|
338.
| (TTTC)3 | 12 | 4879644 | 4879655 | Coding |
|
339.
| (TATT)3 | 12 | 4912071 | 4912082 | Coding |
|
340.
| (GGA)4 | 12 | 4921152 | 4921163 | Coding |
|
341.
| (GGA)4 | 12 | 4921422 | 4921433 | Coding |
|
342.
| (GGA)4 | 12 | 4921692 | 4921703 | Coding |
|
343.
| (AATT)3 | 12 | 4926866 | 4926877 | Non coding |
|
344.
| (ATTT)3 | 12 | 4927603 | 4927614 | Non coding |
|
345.
| (TAG)4 | 12 | 4959542 | 4959553 | Coding |
|
346.
| (AAT)4 | 12 | 4965857 | 4965868 | Non coding |
|
347.
| (TTC)4 | 12 | 4971346 | 4971357 | Coding |
|
348.
| (TAAT)3 | 12 | 4975302 | 4975313 | Non coding |
|
349.
| (AATT)3 | 12 | 5047406 | 5047417 | Non coding |
|
350.
| (AGTA)3 | 12 | 5054587 | 5054598 | Non coding |
|
351.
| (GGAA)3 | 12 | 5096160 | 5096171 | Coding |
|
352.
| (TTTG)3 | 12 | 5133658 | 5133669 | Coding |
|
353.
| (TAAG)3 | 12 | 5133852 | 5133863 | Non coding |
|
354.
| (GTC)4 | 12 | 5137850 | 5137861 | Coding |
|
355.
| (TTAT)3 | 12 | 5139656 | 5139667 | Non coding |
|
356.
| (ATT)4 | 12 | 5141167 | 5141178 | Coding |
|
357.
| (AACT)3 | 12 | 5160104 | 5160115 | Non coding |
|
358.
| (ATTA)3 | 12 | 5174298 | 5174309 | Non coding |
|
359.
| (GTG)4 | 12 | 5177665 | 5177676 | Coding |
|
360.
| (TTAAT)3 | 15 | 5193134 | 5193148 | Non coding |
|
361.
| (CTTA)3 | 12 | 5193187 | 5193198 | Non coding |
|
362.
| (AGTT)3 | 12 | 5194592 | 5194603 | Coding |
|
363.
| (CAA)4 | 12 | 5197602 | 5197613 | Coding |
|
364.
| (CAGAAC)4 | 24 | 5218588 | 5218611 | Coding |
|
365.
| (CAG)4 | 12 | 5220403 | 5220414 | Coding |
|
366.
| (AGGA)3 | 12 | 5254423 | 5254434 | Coding |
|
367.
| (TAAT)3 | 12 | 5265094 | 5265105 | Non coding |
|
368.
| (TGTCTT)3 | 18 | 5298235 | 5298252 | Coding |
|
369.
| (AAAT)3 | 12 | 5348368 | 5348379 | Non coding |
|
370.
| (TAAT)3 | 12 | 5351638 | 5351649 | Coding-Non coding |
|
371.
| (TATT)3 | 12 | 5360678 | 5360689 | Non coding |
|
372.
| (TTTCC)3 | 15 | 5367378 | 5367392 | Coding |
|
373.
| (CCTTT)3 | 15 | 5367397 | 5367411 | Coding |
|
374.
| (AAGGCG)4 | 24 | 5368312 | 5368335 | Coding |
|
375.
| (TTTTA)3 | 15 | 5405603 | 5405617 | Non coding |
|
376.
| (AGA)5 | 15 | 5414343 | 5414357 | Coding |
|
377.
| (AACTG)3 | 15 | 5422287 | 5422301 | Non coding |
|
378.
| (ATTA)3 | 12 | 5444460 | 5444471 | Non coding |
|
379.
| (ATAA)3 | 12 | 5457963 | 5457974 | Non coding |
|
380.
| (AAAT)3 | 12 | 5462948 | 5462959 | Non coding |
|
381.
| (TA)6 | 12 | 5464296 | 5464307 | Non coding |
|
382.
| (AATA)3 | 12 | 5478406 | 5478417 | Non coding |
|
383.
| (ACCC)3 | 12 | 5510679 | 5510690 | Coding |
|
384.
| (TAA)4 | 12 | 5526335 | 5526346 | Non coding |
|
385.
| (AATA)3 | 12 | 5548624 | 5548635 | Non coding |
|
386.
| (TTTA)3 | 12 | 5548794 | 5548805 | Non coding |
|
387.
| (TAA)4 | 12 | 5551458 | 5551469 | Coding |
|
388.
| (ATA)5 | 15 | 5553571 | 5553585 | Non coding |
|
389.
| (ATT)4 | 12 | 5559176 | 5559187 | Non coding |
|
390.
| (AATT)3 | 12 | 5565156 | 5565167 | Non coding |
|
391.
| (ATTT)3 | 12 | 5565320 | 5565331 | Non coding |
|
392.
| (ATTT)3 | 12 | 5592755 | 5592766 | Non coding |
|
393.
| (TAAC)4 | 16 | 5595097 | 5595112 | Non coding |
|
394.
| (AGCCGT)11 | 66 | 5628889 | 5628954 | Coding |
|
395.
| (AGCCGT)7 | 42 | 5628973 | 5629014 | Coding |
|
396.
| (AGCCGT)5 | 30 | 5629051 | 5629080 | Coding |
|
397.
| (AAAG)3 | 12 | 5630443 | 5630454 | Coding |
|
398.
| (GTTT)3 | 12 | 5640749 | 5640760 | Coding |
|
399.
| (TATT)3 | 12 | 5662088 | 5662099 | Non coding |
|
400.
| (TTAG)3 | 12 | 5694437 | 5694448 | Non coding |
|
401.
| (GGA)4 | 12 | 5695203 | 5695214 | Coding |
|
402.
| (GATT)3 | 12 | 5724822 | 5724833 | Non coding |
|
403.
| (AAC)4 | 12 | 5733055 | 5733066 | Coding |
|
404.
| (TTAA)3 | 12 | 5735813 | 5735824 | Non coding |
|
405.
| (TAT)4 | 12 | 5737793 | 5737804 | Non coding |
|
406.
| (ATCT)3 | 12 | 5740030 | 5740041 | Non coding |
|
407.
| (AAAT)3 | 12 | 5743946 | 5743957 | Non coding |
|
408.
| (TAT)4 | 12 | 5765173 | 5765184 | Coding |
|
409.
| (GTCA)3 | 12 | 5766267 | 5766278 | Non coding |
|
410.
| (TATT)3 | 12 | 5792247 | 5792258 | Non coding |
|
411.
| (AATC)3 | 12 | 5793049 | 5793060 | Coding |
|
412.
| (AAT)4 | 12 | 5795844 | 5795855 | Coding |
|
413.
| (TTC)4 | 12 | 5799973 | 5799984 | Non coding |
|
414.
| (CTT)4 | 12 | 5806727 | 5806738 | Non coding |
|
415.
| (GAAA)3 | 12 | 5856862 | 5856873 | Coding |
|
416.
| (AGAA)3 | 12 | 5867929 | 5867940 | Non coding |
|
417.
| (TTTTTC)3 | 18 | 5901938 | 5901955 | Coding |
|
418.
| (TAAT)3 | 12 | 5902493 | 5902504 | Non coding |
|
419.
| (ATTT)10 | 40 | 5902510 | 5902549 | Non coding |
|
420.
| (CTATTC)3 | 18 | 5909948 | 5909965 | Coding |
|
421.
| (CTATTC)3 | 18 | 5910212 | 5910229 | Coding |
|
422.
| (TTTCTA)3 | 18 | 5923964 | 5923981 | Coding |
|
423.
| (TAAT)3 | 12 | 5946127 | 5946138 | Non coding |
|
424.
| (AAT)4 | 12 | 5957317 | 5957328 | Non coding |
|
425.
| (ATTA)3 | 12 | 5966038 | 5966049 | Non coding |
|
426.
| (AAT)4 | 12 | 5975562 | 5975573 | Coding |
|
427.
| (TAAT)3 | 12 | 5989597 | 5989608 | Coding |
|
428.
| (CAA)4 | 12 | 5996382 | 5996393 | Coding |
|
429.
| (CAA)4 | 12 | 5996448 | 5996459 | Coding |
|
430.
| (ATAC)3 | 12 | 6001976 | 6001987 | Coding |
|
431.
| (AATA)3 | 12 | 6005860 | 6005871 | Non coding |
|
432.
| (ATA)4 | 12 | 6005984 | 6005995 | Non coding |
|
433.
| (TTAT)7 | 28 | 6010065 | 6010092 | Non coding |
|
434.
| (ATTA)3 | 12 | 6011723 | 6011734 | Non coding |
|
435.
| (AAAT)4 | 16 | 6015387 | 6015402 | Non coding |
|
436.
| (TAAT)3 | 12 | 6025403 | 6025414 | Non coding |
|
437.
| (AGAA)3 | 12 | 6031868 | 6031879 | Coding |
|
438.
| (TTTA)3 | 12 | 6037717 | 6037728 | Coding |
|
439.
| (TAAA)3 | 12 | 6041680 | 6041691 | Non coding |
|
440.
| (T)13 | 13 | 6070826 | 6070838 | Coding |
|
441.
| (ACT)4 | 12 | 6107857 | 6107868 | Coding |
|
442.
| (AT)6 | 12 | 6110880 | 6110891 | Non coding |
|
443.
| (TCT)5 | 15 | 6148768 | 6148782 | Coding |
|
444.
| (AATT)3 | 12 | 6161526 | 6161537 | Non coding |
|
445.
| (GAT)6 | 18 | 6206656 | 6206673 | Coding |
|
446.
| (AAAT)3 | 12 | 6212042 | 6212053 | Non coding |
|
447.
| (TAG)4 | 12 | 6225036 | 6225047 | Coding |
|
448.
| (T)12 | 12 | 6228960 | 6228971 | Non coding |
|
449.
| (TTC)4 | 12 | 6252290 | 6252301 | Coding |
|
450.
| (AATT)3 | 12 | 6254077 | 6254088 | Non coding |
|
451.
| (ATCT)3 | 12 | 6264584 | 6264595 | Coding |
|
452.
| (ATTA)4 | 16 | 6268491 | 6268506 | Non coding |
|
453.
| (TGTT)3 | 12 | 6270703 | 6270714 | Non coding |
|
454.
| (TA)6 | 12 | 6272385 | 6272396 | Coding |
|
455.
| (TAAT)3 | 12 | 6294270 | 6294281 | Non coding |
|
456.
| (TTA)4 | 12 | 6322729 | 6322740 | Non coding |
|
457.
| (TAT)4 | 12 | 6325253 | 6325264 | Coding |
|
458.
| (CTAT)3 | 12 | 6328455 | 6328466 | Non coding |
|
459.
| (TATT)3 | 12 | 6351093 | 6351104 | Non coding |
|
460.
| (AAC)4 | 12 | 6354573 | 6354584 | Non coding |
|
461.
| (TAAA)3 | 12 | 6362267 | 6362278 | Coding |
|
462.
| (AATT)3 | 12 | 6369034 | 6369045 | Non coding |
|
463.
| (AAC)5 | 15 | 6388961 | 6388975 | Coding |
|
464.
| (AAAT)3 | 12 | 6393269 | 6393280 | Non coding |
|
465.
| (AAT)4 | 12 | 6396173 | 6396184 | Coding-Non coding |
|
466.
| (ATA)4 | 12 | 6408035 | 6408046 | Non coding |
|
467.
| (TAAAAA)4 | 24 | 6429789 | 6429812 | Non coding |
|
468.
| (TAAAAA)3 | 18 | 6430561 | 6430578 | Non coding |
|
469.
| (AGA)4 | 12 | 6451259 | 6451270 | Coding |
|
470.
| (TAAT)3 | 12 | 6458794 | 6458805 | Non coding |
|
471.
| (GGTGTT)4 | 24 | 6462946 | 6462969 | Coding |
|
472.
| (AAAG)3 | 12 | 6464734 | 6464745 | Coding |
|
473.
| (CTTA)3 | 12 | 6478296 | 6478307 | Non coding |
|
474.
| (AAAT)3 | 12 | 6491964 | 6491975 | Non coding |
|
475.
| (TTAT)3 | 12 | 6516809 | 6516820 | Non coding |
|
476.
| (ATT)4 | 12 | 6522732 | 6522743 | Non coding |
|
477.
| (GGAA)3 | 12 | 6573564 | 6573575 | Non coding |
|
478.
| (CAAA)3 | 12 | 6590103 | 6590114 | Non coding |
|
479.
| (TAAT)3 | 12 | 6590283 | 6590294 | Coding |
|
480.
| (GATG)3 | 12 | 6592445 | 6592456 | Coding |
|
481.
| (GAA)4 | 12 | 6622702 | 6622713 | Coding |
|
482.
| (TTG)4 | 12 | 6624734 | 6624745 | Non coding |
|
483.
| (TTTTA)3 | 15 | 6641676 | 6641690 | Coding-Non coding |
|
484.
| (GTA)4 | 12 | 6673942 | 6673953 | Coding |
|
485.
| (TGC)4 | 12 | 6678812 | 6678823 | Coding |
|
486.
| (ATAA)3 | 12 | 6693341 | 6693352 | Non coding |
|
487.
| (ATTA)3 | 12 | 6715959 | 6715970 | Non coding |
|
488.
| (TAA)4 | 12 | 6733078 | 6733089 | Non coding |
|
489.
| (GTG)4 | 12 | 6753433 | 6753444 | Non coding |
|
490.
| (CAT)5 | 15 | 6771461 | 6771475 | Coding |
|
491.
| (AAT)5 | 15 | 6788216 | 6788230 | Coding-Non coding |
|
492.
| (TAA)4 | 12 | 6810982 | 6810993 | Coding |
|
493.
| (TAT)4 | 12 | 6816030 | 6816041 | Coding |
|
494.
| (TAT)4 | 12 | 6817332 | 6817343 | Coding |
|
495.
| (TATT)3 | 12 | 6825515 | 6825526 | Non coding |
|
496.
| (CTTT)3 | 12 | 6859666 | 6859677 | Coding |
|
497.
| (TTTA)3 | 12 | 6872619 | 6872630 | Coding |
|
498.
| (CAA)4 | 12 | 6877265 | 6877276 | Coding |
|
499.
| (ATG)5 | 15 | 6890531 | 6890545 | Coding |
|
500.
| (TTGTTT)5 | 30 | 6892160 | 6892189 | Coding |
|
501.
| (ATATAG)3 | 18 | 6902126 | 6902143 | Non coding |
|
502.
| (AGC)4 | 12 | 6911477 | 6911488 | Coding |
|
503.
| (ACT)4 | 12 | 6921387 | 6921398 | Coding |
|
504.
| (GTTGAG)3 | 18 | 6937212 | 6937229 | Coding |
|
505.
| (GTTGAG)3 | 18 | 6941135 | 6941152 | Coding |
|
506.
| (AATT)3 | 12 | 6955601 | 6955612 | Coding |
|
507.
| (GGT)4 | 12 | 6981353 | 6981364 | Coding |
|
508.
| (TAAA)3 | 12 | 7014533 | 7014544 | Non coding |
|
509.
| (TAAA)3 | 12 | 7020791 | 7020802 | Non coding |
|
510.
| (TCCTT)3 | 15 | 7050174 | 7050188 | Non coding |
|
511.
| (TGTT)3 | 12 | 7061069 | 7061080 | Coding |
|
512.
| (TGC)4 | 12 | 7065636 | 7065647 | Coding |
|
513.
| (ATT)4 | 12 | 7067851 | 7067862 | Coding |
|
514.
| (AAAC)3 | 12 | 7094533 | 7094544 | Non coding |
|
515.
| (TAAT)3 | 12 | 7134881 | 7134892 | Non coding |
|
516.
| (GGAT)3 | 12 | 7162369 | 7162380 | Coding |
|
517.
| (GAGC)3 | 12 | 7166038 | 7166049 | Non coding |
|
518.
| (TAAT)3 | 12 | 7169199 | 7169210 | Non coding |
|
519.
| (ATGA)3 | 12 | 7204910 | 7204921 | Non coding |
|
520.
| (TATT)3 | 12 | 7213549 | 7213560 | Non coding |
|
521.
| (TAGC)3 | 12 | 7223475 | 7223486 | Non coding |
|
522.
| (TTC)4 | 12 | 7224956 | 7224967 | Coding |
|
523.
| (TATT)3 | 12 | 7230162 | 7230173 | Coding |
|
524.
| (AAT)4 | 12 | 7241170 | 7241181 | Coding |
|
525.
| (GAG)4 | 12 | 7242001 | 7242012 | Coding |
|
526.
| (AAAT)3 | 12 | 7271131 | 7271142 | Non coding |
|
527.
| (TTAA)4 | 16 | 7271712 | 7271727 | Non coding |
|
528.
| (CTCA)3 | 12 | 7274316 | 7274327 | Coding |
|
529.
| (TGC)4 | 12 | 7318113 | 7318124 | Coding |
|
530.
| (ATT)4 | 12 | 7330941 | 7330952 | Coding |
|
531.
| (ATT)4 | 12 | 7335895 | 7335906 | Coding |
|
532.
| (TGC)4 | 12 | 7340141 | 7340152 | Coding |
|
533.
| (ATTAT)3 | 15 | 7367649 | 7367663 | Non coding |
|
534.
| (TTC)4 | 12 | 7370095 | 7370106 | Coding |
|
535.
| (AGC)4 | 12 | 7371954 | 7371965 | Coding |
|
536.
| (AATA)3 | 12 | 7405273 | 7405284 | Non coding |
|
537.
| (AAGC)3 | 12 | 7405659 | 7405670 | Non coding |
|
538.
| (ACTA)3 | 12 | 7407997 | 7408008 | Non coding |
|
539.
| (ATTA)4 | 16 | 7440197 | 7440212 | Non coding |
|
540.
| (ACT)4 | 12 | 7485786 | 7485797 | Coding |
|
541.
| (ATC)4 | 12 | 7488358 | 7488369 | Non coding |
|
542.
| (TTAT)3 | 12 | 7493669 | 7493680 | Non coding |
|
543.
| (TAA)4 | 12 | 7517705 | 7517716 | Non coding |
|
544.
| (TTTA)3 | 12 | 7543171 | 7543182 | Non coding |
|
545.
| (GACCAT)4 | 24 | 7543686 | 7543709 | Coding |
|
546.
| (ATT)4 | 12 | 7547538 | 7547549 | Coding |
|
547.
| (TTG)4 | 12 | 7554908 | 7554919 | Coding |
|
548.
| (AATT)5 | 20 | 7581302 | 7581321 | Non coding |
|
549.
| (CATC)3 | 12 | 7601648 | 7601659 | Coding |
|
550.
| (TAC)4 | 12 | 7604880 | 7604891 | Coding |
|
551.
| (GGCT)3 | 12 | 7647098 | 7647109 | Non coding |
|
552.
| (TTG)4 | 12 | 7671602 | 7671613 | Non coding |
|
553.
| (TGC)4 | 12 | 7684063 | 7684074 | Coding |
|
554.
| (TTTTCC)3 | 18 | 7692997 | 7693014 | Coding |
|
555.
| (TAA)4 | 12 | 7696341 | 7696352 | Non coding |
|
556.
| (TATT)4 | 16 | 7698656 | 7698671 | Non coding |
|
557.
| (CACT)3 | 12 | 7733250 | 7733261 | Coding |
|
558.
| (ATAA)4 | 16 | 7736665 | 7736680 | Non coding |
|
559.
| (TA)6 | 12 | 7736911 | 7736922 | Non coding |
|
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|
Kabra,R., Kapil,A., Attarwala,K., Rai,P.K. and Shanker,A. World J Microbiol Biotechnol (2016) 32:71
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